Tomasz Neugebauer

Digital Projects & Systems Development Librarian

Biography    Selected publications    Presentations   

Education

Masters in Library and Information Studies, McGill University, 2006
BA with Distinction, Philosophy/Computer Science, McGill University, 1999

Grants/Awards

Social Sciences and Humanities Research Council of Canada (SSHRC, 2013, PI) - Developing an Open Access Digital Repository for Fine Arts Research in Canada

Social Sciences and Humanities Research Council of Canada (SSHRC, 2016, co-applicant) - The Literary Audio Symposium: Archiving and Mobilizing Literary Sound

Concordia University Library Research Grant (Concordia University, 2017, applicant).  Who wrote about who? Building a datasetfor social network analysis within Canadian art periodicals.

Social Sciences and Humanities Research Council of Canada (SSHRC, 2017, co-applicant) - The SpokenWeb: Conceiving and creating a nationally networked archive of literary recordings for research and teaching

Concordia University Library Research Grant (Concordia University, 2021, applicant). Development of a Discovery Interface for the Archive of the Digital Present for Online Literary Performance in Canada (Pandemic Period).

Articles, Proceedings, Reports:

Neugebauer, T , Lasou, P., Kosavic, A. and Walsh, T.  (2019) Digital Preservation Functionality in Canadian Repositories. Canadian Association of Research Libraries, Open Repositories Working Group.  https://spectrum.library.concordia.ca/986210/   

Camlot, J. , Neugebauer, T.  and Berrizbeitia, F. (2020) Dynamic Systems for Humanities Audio Collections : The Theory and Rationale of Swallow. In: DH 2020 (Digital Humanities 2020 Virtual Conference), July 23, 2020, Ottawa, Canada. https://spectrum.library.concordia.ca/987014/

Neugebauer T. Concordia University - Digital Preservation and Access With Avalon. Guest Post at Avalon Media System Blog. February 20, 2017. http://www.avalonmediasystem.org/blog-post/concordia-university-digital-preservation-and-access-avalon

Neugebauer T, Bordeleau E, Burrus V, Brzezinski R (2015) DNA Data Visualization (DDV): Software for Generating Web-Based Interfaces Supporting Navigation and Analysis of DNA Sequence Data of Entire Genomes. PLoS ONE 10(12): e0143615. doi: 10.1371/journal.pone.0143615

Neugebauer, T. and E. Ménard (2015) SINCERITY: The making of a search engine for images indexed with a bilingual taxonomy. OCLC Systems and Services: International digital library perspectives.   Vol. 31 Iss: 3, pp.112 - 124. DOI: 10.1108/OCLC-03-2014-0020

Neugebauer, T., Carson, P., & Krujelskis, S. (2015). Using SemanticScuttle for managing lists of recommended resources on a library website.Code4Lib Journal, 27. http://journal.code4lib.org/articles/10269

MacDonald, C., Neugebauer, T., Latour, J. The e-artexte digital repository: promoting open access in the Canadian contemporary arts research and publishing community   Art Libraries Journal. 2014, Vol. 39, No. 1, pp. 10-17

Guédon, J.C., Wershler, D., Neugebauer, T., Latour, J. and MacDonald, C. The Potential of Open Access for Fine Arts Documentation with e-artexte Proceedings from the Launch of e-artexte : Open Access Digital Repository for Visual Arts in Canada.Montréal, Qc: Artexte, 2014. http://e-artexte.ca/25118/

Neugebauer, T. & Murray, A. The Critical Role of Institutional Services in Open Access Advocacy.   International Journal of Digital Curation. 2013, Vol. 8, No. 1, pp. 84-106. DOI: 10.2218/ijdc.v8i1.238

Neugebauer, T. Report on the 16th International Conference on Electronic Publishing: Social Shaping of Digital Publishing.   D-Lib Magazine. November/December 2012. Volume 18, Number 11/12. DOI: 10.1045/november2012-neugebauer

Neugebauer, T. & Han, B. Batch Ingesting into EPrints Digital Repository Software.   Information Technology and Libraries. March 2012. Volume 31, Issue 1. DOI: 10.6017/ital.v31i1.1861

Neugebauer, T. A Report from the 2011 ICSTI Workshop on Multimedia and Visualization Innovations for Science.   D-Lib Magazine. January/February 2012. Volume 18, Number 1/2 DOI: 10.1045/january2012-neugebauer

Neugebauer, T., MacDonald, C., Tayler F. Artexte metadata conversion to EPrints: adaptation of digital repository software to visual and media arts documentation.   International Journal on Digital Libraries. Volume 11, Number 4, 263-277, 2012. DOI: 10.1007/s00799-011-0077-5

Neugebauer, T.  Image indexing.   The Indexer. Volume 28, Number 3, September 2010 , pp. 98-103(6)

Bartlett, J. & Neugebauer, T.  Supporting Information Tasks with User-Centred System Design: The development of an interface supporting bioinformatics analysis.   Proceedings of 2006 Annual Conference of the Canadian Association for Information Science.

Bartlett, J. & Neugebauer, T.  A task-based information retrieval interface to support bioinformatics analysis (In IIiX '08: Proceedings of the second international symposium on Information interaction in context, pages 97-101, New York, NY, USA. ACM.)

Software and Research Data:

Neugebauer, T. Python Script to Convert Audio Annotation Files. (2020). GitHub. https://github.com/photomedia/AudioAnnotateConvert 

Berrizbeitia, F., Neugebauer, T. (2020).  Swallow Metadata Management System 2019, GitHub. https://github.com/spokenweb/swallow

Neugebauer, T. (2017) EPrintsData2GML: Apache Pig Latin Script to Convert EPrints XML to Graph GML files and geocoded CSV files. https://github.com/photomedia/EPrintsData2GML

Berrizbeitia, F., Neugebauer, T. (2016) RSS API. https://github.com/fberrizbeitia/RSS-API 

Neugebauer T., Royer-Artuso, N.  Siderosticta Plastid - Photosystem II.  http://spectrum.library.concordia.ca/981471/

Neugebauer, T. DNA Data Visualization (DDV) Software. 2014 

Neugebauer T, Bordeleau E, Burrus V, Brzezinski R.  DNA Data Visualizations Generated with DDV Software (2015). Zenodo. http://dx.doi.org/10.5281/zenodo.33608 

Neugebauer, T.    Simile Timeline for e-artexte/EPrints Bibliographic Data [Source code, Documentation] PhotographyMedia.com. April 2013.

Neugebauer, T.  & Han, B.  ETD-MS Export Plugin.  EPrints Files.   24 Jun. 2010.

Neugebauer, T.  & Han, B.  Breadcrumbs Navigation.  EPrints Files.   22 Jun. 2010.

Neugebauer, T.  & Sarangan Thirukkonda, A.  Re-using Institutional Holdings XML to Add FindISSN Function to Article Finder.  IUG Clearinghouse.  Innovative Users Group.  2 Sep. 2009.

Photography:

Neugebauer, Tomasz.  "Snowstorm in 2011" [Photograph] in Cities and Memory: Sound Photography.  http://citiesandmemory.com/sound-photography/. 2018.

Neugebauer, Tomasz. "Through Natural Light." San Francisco: Blurb.  2016.

Neugebauer, Tomasz. Photograph. Scrivener Creative Review. Issue 22, 1998, p86.

Neugebauer, T., Berrizbeitia, F. (2021, June). Swallow Beyond the Repository: Development of a Custom Metadata Management Software. Presented at the International Conference on Open Repositories (OR2021).

Neugebauer, T., Kuchma, I., Selematsela, D., Biziwe, T., Zimmer, N., Zodwa, T., Havemann, J., Staines, H., Berrizbeitia, F., Stacey, P., Shearer, K., Venema, V., Tykhonov, S. (2021, June). Ideas Challenge 2020/2021 : WikiData Integration with Repository Contents. Presented at the International Conference on Open Repositories (OR2021), Zenodo. http://doi.org/10.5281/zenodo.4914112


Macgregor, George and Neugebauer, Tomasz (2020) Preserving digital content through improved EPrints repository integration with Archivematica. In: UK Archivematica User Group, 2020-09-30

Camlot, J. , Neugebauer, T. (2020). Listening to Literary Video: A Listening Practice on Descriptive Horizons and Parameters. In: SpokenWeb Listening Practice, September 30, 2020.

Camlot, J. , Neugebauer, T.  and Berrizbeitia, F. (2020) Dynamic Systems for Humanities Audio Collections : The Theory and Rationale of Swallow. In: DH 2020 (Digital Humanities 2020 Virtual Conference), July 23, 2020.

Camlot, J., Neugebauer, T., Wiercinski, J.(2019, February) SpokenWeb: Metadata Scheme and Cataloguing Process. In: Séance de travail des membres du centre de recherche interuniversitaire sur les humanités numériques (CRIHN) 2018-2019, February 15, 2019, Université de Montréal. 

Tayler, F., & Neugebauer, T. (2018,June).  Complex Networks of Desire: Mapping Community in Visual Arts Magazines Fireweed, Fuse,and Border/Lines.  Poster session presented at the Digital Humanities Conference (DH2018), Mexico City, Mexico.

Neugebauer, T. (2018) .  Developing an Open Source DNA Data Visualization Application.  True North Science Boot Camp (TNSBC), Concordia University, Montreal, Canada.  May 25, 2018. 

Neugebauer, T., Bradley J., Simpson J.  Digital Preservation through EPrints-Archivematica Integration. International Conference on Open Repositories, June 3-7, 2018, Bozeman, USA.

Neugebauer, T. (2018) .  EPrints-Archivematica Integration.  Archivematica Camp at International Institute for Social History, Amsterdam, Netherlands.  April 13, 2018.  

Neugebauer, T. (2018) Open Systems: From Philosophy to Technology and Libraries.  Info Nexus, February 2, 2018, McGill University. 

Neugebauer, T. (2017) Repository Metadata Network Visualization: Contemporary Canadian Art Publications. In: Open Repositories Conference, June 26-30, 2017, Brisbane, Australia. http://spectrum.library.concordia.ca/982647/

Neugebauer, T. Script Diversity in a Digital Environment. Guest lecture presented to: Language and Information Class at McGill University School of Information Studies. (Fall, 2011) (Fall, 2012) (Winter, 2017)

Wiercinski J., Neugebauer T. Walsh T.  Selecting an Access and Digital Preservation Platform for Humanities Research in Audio and Video Format: Avalon & Archivematica.  Spoken Web: The Literary Audio Symposium. December 2-5, 2016, Concordia University. 

Royer-Artuso, N. and Neugebauer, T. SiderostictaPlastid - Photosystem II. Sampo MagicalBox Installation at Art & Science Days 2016.  Bourges, France – June 1-4 2016. http://www.musinfo.fr/index.php/en/creation/art-science-days/art-science-days-2016/installations  

Neugebauer, T. and Royer-Artuso, N.  DNA Sonification: Carex Siderosticta Plastid - Photosystem II.  Guest lecture presented to: Electroacustic Composition Class (Ricardo Dal Farra) at Concordia University. September 22nd, 2016. http://spectrum.library.concordia.ca/981471/
  
Genome in pixels: the DDV program for DNA sequence visualization.  Poster presented at 115th General Meeting of the American Society for Microbiology (ASM 2015).  New Orleans, USA. May 30th - 2nd June, 2015.

Metadata as a Complex Network: A Case Study of Data Visualization for Art Historical Research.   AHGSA (Art History Graduate Student Association) Annual Conference.  March 6, 2015, Concordia University, Montreal. 

SINCERITY: Designing a new bilingual search engine for image retrieval.  Poster presented at 13th International Conference of the International Society for Knowledge Organization. Jagiellonian University. Krakow, Poland. May 19th-22nd, 2014.

Librarian’s Forum Brown Bag Lunch Series : Concordia University Libraries.  Experiments in data visualization.  January 30th, 2014.

Museum Computer Network (MCN 2013). Depositing Visual Arts Publications into an Open Access Repository. Montreal, Quebec. November 20-23, 2013.

Museums and the Web 2013.  e-artexte: Open Access Digital Repository for Documents in Visual Arts in Canada. Portland, Oregon. April 17-20, 2013.

McGill University School of Information, Introduction to Museology. From Paper to Digital (Winter, 2013)

The 7th International Conference on Open Repositories. Summary View for EPrint History. Edinburgh, Scotland, UK. July 9th – 13th, 2012.

The 6th International Conference on Open Repositories.   Working Papers: Requirements. Austin, Texas. June 6-11, 2011.

The 5th International Conference on Open Repositories.   Report on the Development of Breadcrumbs Navigation Feature in EPrints. Madrid, Spain. July 6th-9th, 2010.

The 5th International Conference on Open Repositories.   Report on the Development of ETD-MS Export Plugin in EPrints. Madrid, Spain. July 6th-9th, 2010.

DOCAM 2010 (Fifth international Summit on the documentation and conservation of the media arts heritage) Metadata case study for the implementation of an open access repository of self-archived media arts documentation. March, 2010.  UQÀM

McGill University School of Information, Information Services and Users. Systems Librarianship. (Winter, 2009)

Information Interaction in Context (IIiX) 2008 Symposium 15 -17 October 2008, organized by the British Computing Society (BCS) and Association for Computing Machinery (ACM).  A task-based information retrieval interface to support bioinformatics analysis.  Conference proceedings published by ACM.

2006 Canadian Association for Information Science Conference. Supporting Information Tasks with User-Centred System Design: The development of an interface supporting bioinformatics analysis.

Librarian’s Forum Brown Bag Lunch Series : Concordia University Libraries.  Open Repositories.   December 15th, 2008.