BIOFINS

Integrated Platform for Biomolecular Function, Interactions and Structure

BIOFINS

Integrated Platform for Biomolecular Function, Interactions and Structure

PUBLICATIONS

Selected publications

  1. S. S. Deshmukh, M. J. Kornblatt and J. A. Kornblatt The influence of truncating the carboxy-terminal amino acid residues of streptococcal enolase on its ability to interact with canine plasminogen PLOS ONE 2019, 14, e0206338. DOI
  2. L. Sacre, D. K. O'Flaherty, P. Archambault, W. Copp, G. H. Peslherbe, H. M. Muchall and C. J. Wilds O4-Alkylated-2-deoxyuridine repair by O6-alkylguanine DNA alkyltransferase is augmented by a C5-fluorine modification ChemBioChem 2018, 19, 575–582. DOI
  3. T. Sabri, P. D. Pawelek and J. A. Capobianco Dual activity of rose Bengal functionalized to albumin-coated lanthanide-doped upconverting nanoparticles: Targeting and photodynamic therapy ACS Applied Materials & Interfaces 2018, 10, 26947-26953. DOI
  4. D. Martins, G. McKay, G. Sampathkumar, M. Khakimova, A. M. English and D. Nguyen Superoxide dismutase activity confers (p)ppGpp-mediated antibiotic tolerance to stationary-phase Pseudomonas aeruginosa Proceedings of the National Academy of Sciences 2018, 115, 9797-9802. DOI
  5. M. Leibovitch, P. J. Hanic-Joyce and P. B. M. Joyce In vitro studies of disease-linked variants of human tRNA nucleotidyltransferase reveal decreased thermal stability and altered catalytic activity Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 2018, 1866, 527–540. DOI
  6. M. Kathiresan and A. M. English LC-MS/MS proteoform profiling exposes cytochrome c peroxidase self-oxidation in mitochondria and functionally important hole hopping from its heme Journal of the American Chemical Society 2018, 140, 12033-12039. DOI
  7. I. Shlaifer, P. K. Quashie, H. Y. Kim and J. L. Turnbull Biochemical characterization of TyrA enzymes from Ignicoccus hospitalis and Haemophilus influenzae: A comparative study of the bifunctional and monofunctional dehydrogenase forms Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 2017, 1865, 312–320. DOI
  8. M. Kathiresan and A. M. English LC-MS/MS suggests that hole hopping in cytochrome c peroxidase protects its heme from oxidative modification by excess H2O2 Chemical Science 2017, 8, 1152-1162. DOI
  9. W. Copp, A. Y. Denisov, J. Xie, A. M. Noronha, C. Liczner, N. Safaee, C. J. Wilds and K. Gehring Influence of nucleotide modifications at the C2' position on the Hoogsteen base-paired parallel-stranded duplex of poly(A) RNA Nucleic Acids Research 2017, 45, 10321–10331. DOI
  10. I. Shlaifer and J. L. Turnbull Characterization of two key enzymes for aromatic amino acid biosynthesis in symbiotic archaea Extremophiles 2016, 20, 503–514. DOI
  11. P. Pakarian and P. D. Pawelek Subunit orientation in the Escherichia coli enterobactin biosynthetic EntA-EntE complex revealed by a two-hybrid approach Biochimie 2016, 127, 1-9. DOI
  12. D. K. O'Flaherty, A. Patra, Y. Su, F. P. Guengerich, M. Egli and C. J. Wilds Lesion orientation of O4-alkylthymidine influences replication by human DNA polymerase η Chemical Science 2016, 7, 4896–4904. DOI
  13. A. I. Gomaa, F. Nsonzi, J. Sedman and A. A. Ismail Enhanced unfolding of bovine β-lactoglobulin structure using microwave treatment: A multi-spectroscopic study Food Biophysics 2016, 11, 370-379. DOI
  14. S. M. C. Gobeil, D. Gagné, N. Doucet and J. N. Pelletier 15N, 13C and 1H backbone resonance assignments of an artificially engineered TEM-1/PSE-4 class A β-lactamase chimera and its deconvoluted mutant Biomolecular NMR Assignments 2016, 10, 93–99. DOI
  15. F. Nsonzi, A. I. Gomaa, J. Sedman and A. A. Ismail Effect of temperature on the structure and cytotoxicity effect of α-lactalbumin-oleic acid complexes against the L1210 cell line Food Structure 2015, 6, 1-12. DOI
  16. D. Martins, I. Bakas, K. McIntosh and A. M. English Peroxynitrite and hydrogen peroxide elicit similar cellular stress responses mediated by the Ccp1 sensor protein Free Radical Biology and Medicine 2015, 85, 138-147. DOI
  17. J. A. Kornblatt, V. Quiros and M. J. Kornblatt The energetics of streptococcal enolase octamer formation: The quantitative contributions of the last eight amino acids at the carboxy-terminus PLOS ONE 2015, 10, e0135754. DOI
  18. D. T. McLaughlin, T. P. T. Nguyen, L. Mengnjo, C. Bian, Y. H. Leung, E. Goodfellow, P. Ramrup, S. Woo and L. A. Cuccia Viedma ripening of conglomerate crystals of achiral molecules monitored using solid-state circular dichroism Crystal Growth & Design 2014, 14, 1067-1076. DOI
  19. D. Martins and A. M. English SOD1 oxidation and formation of soluble aggregates in yeast: Relevance to sporadic ALS development Redox Biology 2014, 2, 632-639. DOI
  20. S. Khalil, I. Jaworski and P. D. Pawelek Identification of a surface glutamine residue (Q64) of Escherichia coli EntA required for interaction with EntE Biochemical and Biophysical Research Communications 2014, 453, 625-630. DOI
  21. D. Foshag, C. Campbell and P. D. Pawelek The C-glycosyltransferase IroB from pathogenic Escherichia coli: Identification of residues required for efficient catalysis Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 2014, 1844, 1619-1630. DOI
  22. V. Balhara, S. S. Deshmukh, L. Kálmán and J. A. Kornblatt The interaction of streptococcal enolase with canine plasminogen: The role of surfaces in complex formation PLoS ONE 2014, 9, e88395. DOI
  23. M. Leibovitch, D. Bublak, P. J. Hanic-Joyce, B. Tillmann, N. Flinner, D. Amsel, K.-D. Scharf, O. Mirus, P. B. M. Joyce and E. Schleiff The folding capacity of the mature domain of the dual-targeted plant tRNA nucleotidyltransferase influences organelle selection Biochemical Journal 2013, 453, 401–412. DOI
  24. A. F. Jaworski and S. M. Aitken Exploration of the six tryptophan residues of Escherichia coli cystathionine β-lyase as probes of enzyme conformational change Archives of Biochemistry and Biophysics 2013, 538, 138–144. DOI
  25. M. E. Goring, M. Leibovitch, E. Gea-Mallorqui, S. Karls, F. Richard, P. J. Hanic-Joyce and P. B. M. Joyce The ability of an arginine to tryptophan substitution in Saccharomyces cerevisiae tRNA nucleotidyltransferase to alleviate a temperature-sensitive phenotype suggests a role for motif C in active site organization Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 2013, 1834, 2097–2106. DOI
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