Archive

A list of publications involving CSFG's contributions from 1996 to the present.


2010 2009 2008 2007 2006       2005 2004
2003 2002 2001 2000 1999 1998-96  

2010
  • Bajwa PK, Pinel D, Martin VJ, Trevors JT and Lee H (2010). Strain improvement of the pentose-fermenting yeast Pichia stipitis by genome shuffling. J Microbiol Methods 81 (2): 179-86.
  • Garcia JI, Seabra AB, Kennedy R, English AM. (2010) Nitrite and nitroglycerin induce rapid release of the vasodilator ATP from erythrocytes: Relevance to the chemical physiology of local vasodilation. J Inorg Biochem. 104 (3): 289-96.
  • Locke SA, McLaughlin JD, Dayanandan S and Marcogliese DJ. (2010) Diversity and specificity in Diplostomum spp. metacercariae in freshwater fishes revealed by cytochrome c oxidase I and internal transcribed spacer sequences. Int J Parasitol. 40 (3): 333-43..
2009
  • Bajwa PK, Shireen T, D'Aoust F, Pinel D, Martin VJ, Trevors JT, Lee H. (2009) Mutants of the pentose-fermenting yeast Pichia stipitis with improved tolerance to inhibitors in hardwood spent sulfite liquor. Biotechnol Bioeng. 104 (5): 892-900.
  • Goldberg AA, Bourque SD, Kyryakov P, Gregg C, Boukh-Viner T, Beach A, Burstein MT, Machkalyan G, Richard V, Rampersad S, Cyr D, Milijevic S, Titorenko VI. (2009) Effect of calorie restriction on the metabolic history of chronologically aging yeast. Exp Gerontol. 44 (9): 555-71.
  • Goldberg AA, Bourque SD, Kyryakov P, Boukh-Viner T, Gregg C, Beach A, Burstein MT, Machkalyan G, Richard V, Rampersad S and Titorenko VI. (2009) A novel function of lipid droplets in regulating longevity. Biochem. Soc. Trans. 37 (5): 1050-1055.
  • Goldberg A and Titorenko VI. Peroxisomes and dimorphic transition in the yeast Yarrowia lipolytica. In: Emergent Functions of the Peroxisome. Eds. Titorenko, V.I. and Terlecky, S.R. Research Signpost, Kerala, India, pp. 87-96 (2009).
  • Khalil S, Pawelek PD. (2009) Ligand-Induced Conformational Rearrangements Promote Interaction between the Escherichia coli Enterobactin Biosynthetic Proteins EntE and EntB. J Mol Biol. 393: 658-671.
  • Kornblatt JA. (2009) Reduction of canine plasminogen leads to an expanded molecule which precipitates. PLoS One. 4 (7): e6196.
  • Powlowski J, Mahajan S, Schapira M, Master ER. (2009) Substrate recognition and hydrolysis by a fungal xyloglucan-specific family 12 hydrolase. Carbohydr Res. 344 (10): 1175-9.
  • Scrivens PJ, Shahrzad N, Moores A, Morin A, Brunet S and Sacher M. (2009) TRAPPC2L is a novel, highly conserved TRAPP-interacting protein. Traffic 10: 724-736
  • Tsang A, Butler G, Powlowski J, Panisko EA, Baker SE. (2009) Analytical and computational approaches to define the Aspergillus niger secretome. Fungal Genet Biol. 46 Suppl 1: S153-S160.
  • Terlecky, S.R. and Titorenko, V.I. (editors). Emergent Functions of the Peroxisome. Research Signpost, Kerala, India, 135 pages (2009).
  • Terlecky, S.R. and Titorenko, V.I. New roles for the peroxisome in cell development, differentiation, morphogenesis, and aging. In: Emergent Functions of the Peroxisome. Eds. Titorenko, V.I. and Terlecky, S.R. Research Signpost, Kerala, India, pp. 1-5 (2009).
  • Titorenko VI, Rachubinski RA. (2009) Spatiotemporal dynamics of the ER-derived peroxisomal endomembrane system. Int Rev Cell Mol Biol. 272: 191-244.
  • Uniacke J, Zerges W. (2009) Chloroplast protein targeting involves localized translation in Chlamydomonas. Proc Natl Acad Sci U S A. 106 (5): 1439-44.
  • Zhou JM, Seo YW, Ibrahim RK. (2009) Biochemical characterization of a putative wheat caffeic acid O-methyltransferase.Plant Physiol Biochem. 47(4): 322-6.
2008
  • Butler G, Ding W, Longo J, Min XJ, O'Toole N, Pillai S, Shu R, Sun J, Yang Y, Xie Q, Benech R, Spurmanis A, Ulycznyj P, Powlowski J, Storms R and Tsang A. (2008). Data management for fungal genomics: an experience report. In: Biological Database Modeling, J. Chen and A. S. Sidhu (eds). Artech House Publishers (Norwood, Massachusetts), pp 103-118.
  • Chakkalakal JV, Miura P, Belanger G, Michel RN and Jasmin BJ. (2008) Modulation of utrophin A mRNA stability in fast versus slow muscles via an AU-rich element and calcineurin signaling. Nucleic Acids Res 36: 826-838.
  • Clark J, English AM, Hansen JC, Francisco JS. (2008) Computational study on the existence of organic peroxy radical-water complexes (RO2.H2O). J Phys Chem A. 112 (7):1587-95.
  • Dryanova A, Zakharov A and Gulick PJ. (2008) Data mining for miRNAs and their targets in the Triticeae. Genome 51: 433-443.
  • English AM, Hansen JC, Szente JJ, Maricq MM. (2008) The effects of water vapor on the CH3O2 self-reaction and reaction with HO2. J Phys Chem A. 112 (39): 9220-8.
  • Hickey DA. (2008) Highly similar noncoding genomic DNA sequences: ultraconserved, or merely widespread? Genome 51: 396-397.
  • Kermany AR, Zhou X and Hickey DA. (2008) Joint stationary moments of a two-island diffusion model of population subdivision. Theor Popul Biol. 74(3): 226-32.
  • Kornblatt JA, Zhou J-M and Ibrahim, RK. (2008) Structure-activity relationships of wheat flavone O-methyltransferase - a homodimer of convenience. FEBS J 275: 2255-2266.
  • Lei Y, Pawelek PD and Powlowski J. (2008) A shared binding site for NAD+ and coenzyme A in an acetaldehyde dehydrogenase involved in bacterial degradation of aromatic compounds. Biochemistry 47: 6870-6882.
  • Master ER, Agar NY, Gómez-Gil L, Powlowski JB, Mohn WW and Eltis LD. (2008) Biphenyl dioxygenase from an arctic isolate is not cold adapted. Appl Environ Microbiol. 74: 3908-3911.
  • Master ER, Zheng Y, Storms R, Tsang A and Powlowski J. (2008) A xyloglucan-specific family 12 glycosyl hydrolase from Aspergillus niger: recombinant expression, purification and characterization. Biochem J. 411: 161-170.
  • Meusnier I, Singer GA, Landry JF, Hickey DA, Hebert PD, Hajibabaei M. (2008) A universal DNA mini-barcode for biodiversity analysis. BMC Genomics 9: 214.
  • Min XJ, Hickey DA. An evolutionary footprint of age-related natural selection in mitochondrial DNA (2008). J Mol Evol. 67 (4): 412-7.
  • Sacher M, Kim Y-G, Lavie A, Oh B-H and Segev N. (2008) The TRAPP complex: insights into its architecture and functionTraffic 9: 2032-2042.
  • Shan X, Russell TA, Paul SM, Kushner DB and Joyce PBM. (2008) Characterization of a temperature-sensitive mutation that impairs the function of yeast tRNA nucleotidyltransferase. Yeast 25: 219-233.
  • Simon DF, Descombes P, Zerges W and Wilkinson KJ. (2008) Global expression pofiling of Chlamydomonas reinhardtii exposed to trace levels of free cadmium. Environ Toxicol Chem 27: 1668-1675.
  • Timerghazin QK, Peslherbe GH and English AM. (2008) Structure and stability of HSNO, the simplest S-nitrosothiol. Phys Chem Chem Phys 10: 1532-1539.
  • Timerghazin QK, English AM and Peslherbe GH. (2008) On the Multireference Character of S-Nitrosothiols. Chem Phys Letts 454: 24-29.
  • Uniacke J and Zerges W. (2008) Stress induces the assembly of RNA granules in the chloroplast of Chlamydomonas reinhardtii. Journal of Cell Biology 182: 641-646.
  • Zhao S, Choy BS, Kornblatt MJ (2008) Effects of the G376E and G157D mutations on the stability of yeast enolase--a model for human muscle enolase deficiency. FEBS J. 275(1):97-106.
  • Zhou J-M, Fukushi Y, Wollenweber E, Ibrahim RK. (2008) Characterization of two O-methyltransferase-like genes in barley and maize. Pharmaceut Biol 46: 26-34.
2007
  • Cluis CP, Burja AM and Martin VJJ. (2007) Current prospects for the metabolic engineering of ubiquinone-10 in microbes.Trends Biotechnol 25: 481-534.
  • Gold ND and Martin VJJ. (2007) Global view of the Clostridium thermocellum cellulosome revealed by quantitative proteomic analysis. J Bacteriol 189: 6787-6795.
  • Guo T, Gregg C, Boukh-Viner T, Kyryakov P, Goldberg A, Bourque S, Banu F, Haile S, Milijevic S, San KH, Solomon J, Wong V and Titorenko VI. (2007) A signal from inside the peroxisome initiates its division by promoting the remodeling of the peroxisomal membrane. J Cell Biol. 177(2): 289-303.
  • Hajibabaei M, Singer GA, Hebert PD and Hickey DA. (2007) DNA barcoding: how it complements taxonomy, molecular phylogenetics and population genetics. Trends Genet. 23(4): 167-72.
  • Kiel JA, Titorenko VI, van der Klei IJ and Veenhuis M. (2007) Overproduction of translation elongation factor 1-alpha (eEF1A) suppresses the peroxisome biogenesis defect in a Hansenula polymorpha pex3 mutant via translational read-through. FEMS Yeast Res. 7(7): 1114-25.
  • Kornblatt JA, Barretto T, Chigogidze K and Chirwa B. (2007) Canine plasminogen: Spectral responses to changes in 6-aminohexanoate and temperature. Analytical Chemistry Insights 2: 17-29.
  • Lahjouji K, Storms R, Xiao Z, Joung KB, Zheng Y, Powlowski J, Tsang A and Varin L. (2007) Biochemical and molecular characterization of a cellobiohydrolase from Trametes versicolor. Appl Microbiol Biotechnol 75(2): 337-46.
  • Lam K, Ibrahim RK, Behdad BB and Dayanandan S. (2007) Structure-Function and Evolution of Plant O-Methyltransferases.Genome 50: 1001-1015.
  • Laterreur J and English AM. (2007) Hemoglobin S-nitrosation on Oxygneation of Nitrite Deoxyhemoglobin Incubations is Attenuated by Methemoglobin. J Inorg Biochem 101: 1827–1835.
  • Michel RN, Chin ER, Chakkalakal JV, Eibl JK and Jasmin BJ (2007) Invited review: Ca2+/Calmodulin-based signalling in the regulation of the muscle fibre phenotype and its therapeutic potential via modulation of utrophin A and myostatin expression.Appl Physiol Nutr Me 32: 921-929.
  • Marsolais F, Boyd J, Paredes Y, Schinas AM, Garcia M, Elzein S and Varin L. (2007) Molecular and biochemical characterization of two brassinosteroid sulfotransferases from Arabidopsis, AtST4a (At2g14920) and AtST1 (At2g03760).Planta 225(5): 1233-44.
  • Min XJ and Hickey DA. (2007) DNA barcodes provide a quick preview of mitochondrial genome composition. PLoS ONE 2: e325.
  • Min XJ and Hickey DA. (2007) DNA asymmetric strand bias affects the amino acid composition of mitochondrial proteins.DNA Res 14: 201-6.
  • Min XJ and Hickey DA. (2007) Assessing the effect of varying sequence length on DNA barcoding of fungi. Mol Ecol Notes. 7(3): 365-373.
  • Monroy AF, Dryanova A, Malette B, Oren DH, Ridha Farajalla M, Liu W, Danyluk J, Ubayasena LW, Kane K, Scoles GJ, Sarhan F and Gulick PJ. (2007) Regulatory gene candidates and gene expression analysis of cold acclimation in winter and spring wheat. Plant Mol Biol 64(4): 409-23.
  • Mukhopadhyay A, Redding AM, Joachimiak M, Arkin AP, Borglin S, Dehal P, Chakraborty R, Geller JT, Giles B, Hazen TC, He Q, Joyner DC, Martin VJJ, Wall JD, Yang ZK, Zhou J and Keasling JD. (2007) The varied responses of Desulfovibrio vulgaris Hildenborough to low and high oxygen exposure. J Bacteriol 189: 5996-6010.
  • Pfleger BF, Pitera DJ, Newman JD, Martin VJJ and Keasling JD. (2007) Microbial sensors for small molecules: Development of a mevalonate biosensor. Metab Eng 9: 30-38.
  • Ridha Farajalla M and Gulick PJ. (2007) The alpha-tubulin gene family in wheat (Triticum aestivum L.) and differential gene expression during cold acclimation. Genome 50(5): 502-510.
  • Roy JF, Chretien MN, Woodside B and English AM. (2007) Reduction and S-nitrosation of the neuropeptide oxytocin: Implications for its biological function. Nitric Oxide 17(2): 82-90.
  • Schmidt von Braun S, Sabetti A, Hanic-Joyce PJ, Gu J, Schleiff E and Joyce PBM. (2007) Dual targeting of the tRNA nucleotidyltransferase in plants: not just the signal. J. Exp. Bot. 58: 4083-4093.
  • Tardif G, Kane NA, Adam H, Labrie L, Major G, Gulick P, Sarhan F and Laliberte JF. (2007) Interaction network of proteins associated with abiotic stress response and development in wheat. Plant Mol Biol. 63(5): 703-18.
  • Timerghazin QK, Peslherbe GH and English AM. (2007) Resonance description of S-nitrosothiols: insights into reactivity. Org Lett. 9(16): 3049-52.
  • Uniacke J and Zerges W. (2007) Photosystem II assembly and repair are differentially localized in Chlamydomonas. Plant Cell19: 3640-3654.
  • Wang HC and Hickey DA. (2007) Rapid divergence of codon usage patterns within the rice genome. BMC Evol Biol. 7 Suppl 1: S6.
  • Whiteway M and Bachewich C. (2007) Morphogenesis in Candida albicans. Annu Rev Microbiol. 61: 529-53.
  • Xu D, Jiang B, Ketela T, Lemieux S, Veillette K, Martel N, Davison J, Sillaots S, Trosok S, Bachewich C, Bussey H, Youngman P and Roemer T. (2007) Genome-wide fitness test and mechanism-of-action studies of inhibitory compounds in Candida albicans. PLoS Pathog. 3(6): e92.
  • Zajickova K, Vrbikova J, Canaff L, Pawelek PD, Goltzman D and Hendy GN (2007) Identification and Functional Characterization of a Novel Mutation in the Calcium-Sensing Receptor Gene in Familial Hypocalciuric Hypercalcemia: Modulation of Clinical Severity by Vitamin D Status. J Clin Endocr Metab 92: 2616-2623.
2006
  • Baker C, Shaban-Nejad A, Su X, Haarslev V and Butler G. (2006) Semantic web infrastructure for fungal enzyme biotechnologists. J. Web Sem. 4(3): 168-180.
  • Benkel B, Kollers S, Fries R, Sazanov A, Yoshida E, Valle E, Davoren J and Hickey D. (2006) Characterization of the bovine ampkgamma1 gene. Mamm Genome 16: 194-200.
  • Bonvin J, Aponte RA, Marcantonio M, Singh S, Christendat D and Turnbull JL. (2006) Biochemical characterization of prephenate dehydrogenase from the hyperthermophilic bacterium Aquifex aeolicus. Protein Sci. 15(6): 1417-32.
  • Boukh-Viner T and Titorenko VI. (2006) Lipids and lipid domains in the peroxisomal membrane of the yeast Yarrowia lipolytica.Biochim Biophys Acta 1763(12): 1688-96.
  • Carter DM, Miousse IR, Gagnon J-N, Martinez E, Clements A, Lee J, Hancock MA, Gagnon H, Pawelek PD and Coulton JW (2006) Interactions Between TonB from Escherichia coli and the Periplasmic Protein FhuD. J Biol Chem 281: 35413-35424.
  • Couture MMJ, Martin VJJ, Mohn WW and Eltis LD. (2006) Characterization of DitA3, the [Fe3S4] ferredoxin of an aromatic ring-hydroxylating dioxygenase from a diterpenoid-degrading microorganism. BBA-Proteins Proteom 1764: 1462-1469.
  • Chakkalakal JV, Michel SA, Chin ER, Michel RN and Jasmin BJ. (2006) Targeted inhibition of Ca+2/calmodulin signaling exacerbates the dystrophic phenotype in mdx mouse muscle. Human Molecular Genetics 15(9): 1423-1435.
  • Gidda SK and Varin L. (2006) Biochemical and molecular characterization of flavonoid 7-sulfotransferase from Arabidopsis thaliana. Plant Physiol Biochem. 44(11-12): 628-36.
  • Hajibabaei M, Singer GA and Hickey DA. (2006) Benchmarking DNA barcodes: An assessment using available primate sequences. Genome 49: 851-854.
  • Hamzeh M, Périnet P and Dayanandan S. (2006) Genetic Relationships among species of Populus (Salicaceae) based on nuclear genomic data. Journal of the Torrey Botanical Society 133(4): 519-527.
  • Houde M, Belcaid M, Ouellet F, Danyluk J, Monroy AF, Dryanova A, Gulick P, Bergeron A, Laroche A, Links MG, MacCarthy L, Crosby WL and Sarhan F. (2006) Wheat EST resources for functional genomics of abiotic stress. BMC Genomics 7: 149.
  • Jiang H and English AM. (2006) Evaluation of D10-Leu metabolic labeling coupled with MALDI-MS analysis in studying the response of the yeast proteome to H2O2 challenge. J Proteome Res. 5(10): 2539-46.
  • Jiang H and English AM. (2006) Phenotypic analysis of the ccp1Delta and ccp1Delta-ccp1W191F mutant strains of Saccharomyces cerevisiae indicates that cytochrome c peroxidase functions in oxidative-stress signaling. J Inorg Biochem. 100(12): 1996-2008.
  • MacWilliams H, Doquang K, Pedrola R, Dollman G, Grassi D, Peis T, Tsang A and Ceccarelli A. (2006) A retinoblastoma ortholog controls stalk/spore preference in Dictyostelium. Development 133(7): 1287-97.
  • O’Toole N, Min X-J, Butler G, Storms R and Tsang A. (2006) Sequence-based analysis of fungal secretomes. Applied Mycology and Biotechnology 6: 277-296.
  • Semova N, Storms R, John T, Gaudet P, Ulycznyj P, Min X-J, Sun J, Butler G and Tsang A. (2006) Generation, annotation, and analysis of an extensive Aspergillus niger EST collection. BMC Microbiology 6: 7.
  • Shen B, Scaiano JC and English AM. (2006) Zeolite encapsulation decreases TiO2-photosensitized ROS generation in cultured human skin fibroblasts. Photochem Photobiol. 82(1): 5-12.
  • Sun W, Singh S, Zhang R, Turnbull JL and Christendat D. (2006) Crystal structure of prephenate dehydrogenase from Aquifex aeolicus. Insights into the catalytic mechanism. J Biol Chem. 281(18): 12919-28.
  • Titorenko VI and Mullen RT. (2006) Peroxisome biogenesis: the peroxisomal endomembrane system and the role of the ER. J Cell Biol. 174(1): 11-7.
  • Tsang A, Semova N, Daigneault K, O'Toole N, Benech R-O, Butler G, Storms R, Powlowski J, Wenzel T, van Rooijen R, Riemens A and Meima R. (2006) Genome-wide approach to identify and characterize fungal extracellular proteins.Scandinavian Journal of Food & Nutrition 50 (S1): 6-8.
  • Wang HC, Xia X and Hickey D. (2006) Thermal adaptation of the small subunit ribosomal RNA gene: a comparative study. J Mol Evol. 63: 120-126.
  • Xia X, Wang H, Xie Z, Carullo M, Huang H and Hickey D. (2006) Cytosine usage modulates the correlation between CDS length and CG content in prokaryotic genomes. Mol Biol Evol. 23: 1450-1454.
  • Xiao Z, Storms R and Tsang A. (2006) A quantitative starch-iodine method for measuring alpha-amylase and glucoamylase activities. Anal Biochem. 351(1):146-8. Erratum in: Anal Biochem. 2007 362 (1): 154.
  • Ye M and English AM. (2006) Binding of polyaminocarboxylate chelators to the active-site copper inhibits the GSNO-reductase activity but not the superoxide dismutase activity of Cu,Zn-superoxide dismutase. Biochemistry 45 (42): 12723-32.
  • Yoshikuni Y, Martin VJJ, Ferrin TE and Keasling JD. (2006) Engineering cotton (+)-d-cadinene synthase to an altered function: Germacrene D-4-ol synthase. Chem Biol 13: 91-98.
  • Zhou JM, Gold ND, Martin VJ, Wollenweber E and Ibrahim RK. (2006) Sequential O-methylation of tricetin is catalyzed by one gene product in wheat leaves. BBA-Gen Subjects 1760: 989-1150.
  • Zhou JM, Gold ND, Martin VJ, Wollenweber E and Ibrahim RK. (2006) Sequential O-methylation of tricetin by a single gene product in wheat. Biochim Biophys Acta 1760(7): 1115-24.
  • Zhou JM, Fukushi Y, Wang XF and Ibrahim RK. (2006) Characterization of a novel O-methyltransferase gene in rice. Nat Prod Commun 1: 981-984.
2005
  • Bard H, English AM, Gagnon C and Bellemin K. (2005) The effect of adult hemoglobin on red blood cell nitric oxide levels during fetal development. Biol. Neonate 87(3): 203-6.
  • Benkel BF, Nguyen T, Uno Y, Ponce de Leon FA and Hickey DA. (2005) Structural organization and chromosomal location of the chicken alpha-amylase gene family. Gene 362: 117-124.
  • Boukh-Viner T, Guo T, Alexandrian A, Cerracchio A, Gregg C, Haile S, Kyskan R, Milijevic S, Oren D, Solomon J, Wong V, Nicaud JM, Rachubinski RA, English AM and Titorenko VI. (2005) Dynamic ergosterol- and ceramide-rich domains in the peroxisomal membrane serve as an organizing platform for peroxisome fusion. J. Cell Biol. 168: 761-773.
  • Boys J, Cherry M and Dayanandan S. (2005) Microsatellite analysis reveals genetically distinct populations of red pine (Pinus resinosa: Pinaceae). American Journal of Botany 92: 833-841.
  • Carter DM and Kornblatt JA. (2005) Interactions between canine plasminogen and 8-anilino-1-naphthalene sulfonate: structural insights from a fluorescent probe. Cellular and Molecular Biology 51: OL755-OL765.
  • Devanathan G, Turnbull JL, Ziomek E, Purisima EO, Menard R and Sulea T. (2005) Carboxy-monopeptidase substrate specificity of human cathepsin X. Biochem Biophys Res Commun. 329(2): 445-52.
  • Gregg C, Guo T, Boukh-Viner T, Alexandrian A, Banu F, Cerracchio A, Haile S, Makoroka L, Milijevic S, Sison C, Solomon J, Wong V, Nicaud JM, Rachubinski RA, English AM and Titorenko VI. (2005) Molecular mechanism for the coordination of organelle growth and division. Biochem. Cell Biol. 83: 779.
  • Gulick PJ, Drouin S, Yu Z, Danyluk J, Poisson G, Monroy AF and Sarhan F. (2005) Genotypic Comparison of Low Temperature Responsive Genes in Winter and Spring Wheat Using Microarray Analysis. Genome 48: 913-923.
  • Ibrahim R.K. (2005) A forty-year journey in plant research: original contributions to flavonoid biochemistry. Can J Bot 83: 433-450.
  • Kornblatt JA and Schuck P. (2005) The influence of temperature on the conformation of canine plasminogen: an analytical ultracentrifugation and dynamic light scattering study. Biochemistry 44: 13122-13131.
  • Min XJ, Butler G, Storms R and Tsang A. (2005) OrfPredictor: predicting protein-coding regions in EST-derived sequences.Nucleic Acids Res. 33 (Web Server issue): W677-80. 
  • Min XJ, Butler G, Storms R and Tsang A. (2005) TargetIdentifier: a webserver for identifying full-length cDNAs from EST sequences. Nucleic Acids Res. 33 (Web Server issue): W669-72. 
  • Shen B and English AM. (2005) Mass spectrometric analysis of nitroxyl-mediated protein modification: comparison of products formed with free and protein-based cysteines. Biochemistry 44 (42): 14030-44.
  • Storms R, Zheng Y, Li H, Sillaots S, Martinez-Perez A and Tsang A. (2005) Plasmid vectors for protein production, gene expression and molecular manipulations in Aspergillus niger. Plasmid 53 (3): 191-204.
  • Xiao Z, Storms R and Tsang A. (2005) Microplate-based carboxymethylcellulose assay for endoglucanase activity. Anal. Biochem. 342 (1): 176-8.
  • Williams BA and Tsang A. (2005) Analysis of multiple classes of abscisic acid-responsive genes during embryogenesis in zea mays. Developmental Genetics 15 (5): 415 - 424.
  •  

2004
  • Anzellotti D and Ibrahim RK. (2004) Molecular characterization and functional expression of flavonol 6-hydroxylase. BMC Plant Biol. 13(4)20.
  • Bard H, English AM, Bellemin K and Gagnon C. (2004) Developmental changes in NO bioavailability in fetal erythrocytes.Semin. Perinatol. 28(4): 312-6.
  • Chirwa NT and Herrington MB. (2004) Role of MetR and PurR in the activation of glyA by CsgD in Escherichia coli K-12. Can. J. Microbiol. 50: 683-690.
  • Chretien MN, Shen B, Garcia H, English A and Scaiano J. (2004) Ship-in-a-Bottle Synthesis of Fluorescence Labeled Nanoparticles: Applications in Cellular Imaging. Photochem. Photobiol. 80(3): 434-7.
  • Decelle B, Tsang A and Storms RK. (2004) Cloning, functional expression and characterization of three Phanerochaete chrysosporium endo-1,4-beta-xylanases. Curr. Genet. 46(3): 166-75. 
  • Dickens AF, Gélinas Y, Masiello CA, Wakeham SG and Hedges JI. (2004) Reburial of fossil organic carbon in marine sediments. Nature 427: 336-339.
  • Dodard SG, Powlowski J and Sunahara GI. (2004) Biotransformation of 2,4,6-trinitrotoluene (TNT) by enchytraeids (Enchytraeus albidus) in vivo and in vitro. Environ. Pollut. 131(2): 263-73.
  • Hamzeh M and Dayanandan S. (2004) Phylogeny of Populus (Salicaceae) based on nucleotide sequences of chloroplast trnT-trnF region and the nuclear rDNA. American Journal of Botany 91: 1398-1409.
  • Huang TS, Anzellotti D, Dedaldechamp F and Ibrahim RK. (2004) Partial purification, kinetic analysis, and amino acid sequence information of a flavonol 3-O-methyltransferase from Serratula tinctoria. Plant Physiol. 134(4): 1366-76.
  • Kornblatt JA, Muzac I, Lim Y, Ahn JH and Ibrahim RK. (2004) Role of Serine 286 in cosubstrate binding and catalysis of a flavonol O-methyltransferase. Biochem. Cell. Biol. 82: 531-537.
  • Kornblatt JA, Marchal S, Rezaei H and Balny C. (2004) Characterization of a complex formed between human plasminogen and recombinant sheep prion: pressure and thermal sensitivity of complex formation. Cell Mol Biol (Noisy-le-grand) 50(4): 387-96.
  • Lam K, Dayanandan S and Ibrahim RK. (2004) Phylogenomic analysis of plant O-methyltransferases. In “Polyphenols Communications” Hoikkala A, Soiudinsalo O, eds, University of Helsinki Press, 22, 497-498.
  • Ouellet M, Aitken SM, English AM and Percival MD. (2004) Aromatic hydroxamic acids and hydrazides as inhibitors of the peroxidase activity of prostaglandin H2 synthase-2. Arch. Biochem. Biophys. 431(1): 107-18.
  • Petriv OI, Tang L, Titorenko VI and Rachubinski RA. (2004) A new definition for the consensus sequence of the peroxisome targeting signal type 2. J. Mol. Biol. 341: 119-134.
  • Tao L and English AM. (2004) Protein S-glutathiolation triggered by decomposed S-nitrosoglutathione. Biochemistry 43(13): 4028-38.
  • Tsang A. (2004) Genomic Approaches to Identifying Fungal Enzymes for the Forest Industry. Genomics for Future Forests.First Canadian Forest Genomics Symposium. 55-58. Natural Resources Canada.
  • Titorenko VI and Rachubinski R.A. (2004) The peroxisome: orchestrating important developmental decisions from inside the cell. J. Cell Biol. 164: 641-645.
  • Yang H, Ahn JH, Ibrahim RK, Lee S and Lim Y. (2004) The three-dimensional structure of Arabidopsis thaliana O-methyltransferase predicted by homology-based modelling. J. Mol. Graph. Model. 23(1): 77-87.

 

2003
  • Aitken SM, Ouellet M, Percival MD and English AM. (2003) Mechanism of horseradish peroxidase inactivation by benzhydrazide: a critical evaluation of arylhydrazides as peroxidase inhibitors. Biochem. J. 375(Pt 3)613-21.
  • Barth G, Beckerich JM, Dominguez A, Kerscher S, Ogrydziak D, Titorenko VI and Gaillardin C. (2003) Functional genetics of Yarrowia lipolytica. In: Functional Genetics of Industrial Yeasts. Series: Topics in Current Genetics, Vol. 2, ed. J.H. de Winde. Springer-Verlag Heidelberg, Germany, pp. 227-272.
  • Chirwa NT and Herrington MB. (2003) CsgD, a regulator of curli and cellulose synthesis, also regulates serine hydroxymethyltransferase synthesis in Escherichia coli K-12. Microbiology 149525-535.
  • Dodard SG, Renoux AY, Powlowski J and Sunahara GI. (2003) Lethal and subchronic effects of 2,4,6-trinitrotoluene (TNT) on Enchytraeus albidus in spiked artificial soil. Ecotoxicol. Environ. Saf. 54(2)131-8.
  • Gidda SK, Miersch O, Levitin A, Schmidt J, Wasternack C and Varin L. (2003) Biochemical and molecular characterization of a hydroxyjasmonate sulfotransferase from Arabidopsis thaliana. J. Biol. Chem. 278(20)17895-900.
  • Guo T, Kit YY, Nicaud JM, Le Dall MT, Sears SK, Vali H, Chan H, Rachubinski RA and Titorenko VI. (2003) Peroxisome division is regulated by a signal from inside the peroxisome. J. Cell Biol. 1621255-1266.
  • Kornblatt JA, Marchal S, Rezaei H, Kornblatt MJ, Balny C, Lange R, Debey MP, Hui Bon Hoa G, Marden MC and Grosclaude J. (2003) The fate of the prion protein in the prion/plasminogen complex. Biochem. Biophys. Res. Commun. 305(3)518-22.
  • Kornblatt JA, Hill BC and Marden MC. (2003) The influence of temperature and osmolyte on the catalytic cycle of cytochrome c oxidase. Eur. J. Biochem. 270(2)253-60.
  • Manjasetty BA, Powlowski J and Vrielink A. (2003) Crystal structure of a bifunctional aldolase-dehydrogenase: sequestering a reactive and volatile intermediate. Proc. Nat. Acad. Sci. U.S.A. 100(12)6992-7.
  • Ndong C, Anzellotti D, Ibrahim RK, Huner NP and Sarhan F. (2003) Daphnetin methylation by a novel O-methyltransferase is associated with cold acclimation and photosystem II excitation pressure in rye. J. Biol. Chem. 278(9)6854-61.
  • Papp R, Ekiel I and English AM. (2003) ESI-MS and FTIR studies of the interaction between the second PDZ domain of hPTP1E and target peptides. Biochem. Cell. Biol. 81(2)71-80.
  • Roemer T, Jiang B, Davison J, Ketela T, Veillette K, Breton A, Tandia F, Linteau A, Sillaots S, Marta C, Martel N, Veronneau S, Lemieux S, Kauffman S, Becker J, Storms R, Boone C and Bussey H. (2003) Large-scale essential gene identification in Candida albicans and applications to antifungal drug discovery. Mol. Microbiol. 50(1)167-81.
  • Romeo AA, Capobianco JA and English AM. (2003) Superoxide dismutase targets NO from GSNO to Cysbeta93 of oxyhemoglobin in concentrated but not dilute solutions of the protein. J. Am. Chem. Soc. 125(47)14370-8.
  • Tao L and English AM. (2003) Mechanism of S-nitrosation of recombinant human brain calbindin D28K. Biochemistry 42(11):3326-34.
  • Tsaprailis G and English AM. (2003) Different pathways of radical translocation in yeast cytochrome c peroxidase and its W191F mutant on reaction with H(2)O(2) suggest an antioxidant role. J. Biol. Inorg. Chem. 8(3)248-55.
  • Wright PJ and English AM. (2003) Scavenging with TEMPO* to identify peptide- and protein-based radicals by mass spectrometry: advantages of spin scavenging over spin trapping. J. Am. Chem. Soc. 125(28)8655-65.
  •  

2002
  • Akhter S, Vignini A, Wen Z, English AM, Wang PG and Mutus B (2002) Evidence for S-Nitrosothiol-dependent Changes in Fibrinogen that do not Involve Transnitrosation or Thiolation. Proc Natl Acad Sci USA 99: 9172-9177.
  • Cadieux E, Vrajmasu V, Achim C, Powlowski J and Munck E. (2002) Biochemical, Mossbauer, and EPR studies of the diiron cluster of phenol hydroxylase from Pseudomonas sp. strain CF 600. Biochemistry 41(34)10680-91.
  • Charron JB, Breton G, Danyluk J, Muzac I, Ibrahim RK and Sarhan F. (2002) Molecular and biochemical characterization of a cold-regulated phosphoethanolamine N-methyltransferase from wheat. Plant Physiol. 129(1)363-73.
  • Galazzo DE, Dayanandan S, Marcogliese D and McLaughlin JD. (2002) Molecular systematics of some North American species of Diplostomum (Digenea) based on rDNA sequence data and comparisons with European congeners. Canadian Journal of Zoology 802207-2217.
  • Giaever G, Chu AM, Ni L, Connelly C, Riles L, Veronneau S, Dow S, Lucau-Danila A, Anderson K, Andre B, Arkin AP, Astromoff A, El-Bakkoury M, Bangham R, Benito R, Brachat S, Campanaro S, Curtiss M, Davis K, Deutschbauer A, Entian KD, Flaherty P, Foury F, Garfinkel DJ, Gerstein M, Gotte D, Guldener U, Hegemann JH, Hempel S, Herman Z, Jaramillo DF, Kelly DE, Kelly SL, Kotter P, LaBonte D, Lamb DC, Lan N, Liang H, Liao H, Liu L, Luo C, Lussier M, Mao R, Menard P, Ooi SL, Revuelta JL, Roberts CJ, Rose M, Ross-Macdonald P, Scherens B, Schimmack G, Shafer B, Shoemaker DD, Sookhai-Mahadeo S, Storms RK, Strathern JN, Valle G, Voet M, Volckaert G, Wang CY, Ward TR, Wilhelmy J, Winzeler EA, Yang Y, Yen G, Youngman E, Yu K, Bussey H, Boeke JD, Snyder M, Philippsen P, Davis RW and Johnston M. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896)387-91.
  • Hanic-Joyce PJ and Joyce PB. (2002) Characterization of a gene encoding tRNA nucleotidyltransferase from Candida glabrata. Yeast 19(16)1399-411.
  • Heng J and English AM (2002) Quantitative Analysis of the Yeast Proteome by Incorporation of Isotopically Labeled Leucine. J Proteome Res 1: 345-350.
  • Jain RK, Chang WT, Geetha C, Joyce PB and Gorr SU. (2002) In vitro aggregation of the regulated secretory protein chromogranin A. Biochem. J. 368(Pt 2)605-10. 
  • Jiang H and English AM. (2002) Quantitative analysis of the yeast proteome by incorporation of isotopically labeled leucine. J. Proteome Res. Jul-Aug;1(4)345-50.
  • Kornblatt JA and Kornblatt MJ. (2002) The effects of osmotic and hydrostatic pressures on macromolecular systems.Biochim. Biophys. Acta. 1595(1-2)30-47.
  • Kornblatt JA and Kornblatt MJ. (2002) Water as it applies to the function of enzymes. Int. Rev. Cytol. 21549-73.
  • Kornblatt JA and Kornblatt MJ. (2002) Water as it applies to the function of enzymes. In: Molecular Mechanisms of Water Transport (Zeuthen T. and Stein W., eds.), Academic Press New York, pp. 49-73.
  • Petriv OI, Pilgrim DB, Rachubinski RA and Titorenko VI. (2002) RNA interference of peroxisome-related genes in C. elegans: a new model for human peroxisomal disorders. Physiol. Genomics 1079-91.
  • Romeo AA, Capobianco JA and English AM. (2002) Heme nitrosylation of deoxyhemoglobin by s-nitrosoglutathione requires copper. J Biol. Chem. 277(27)24135-41.
  • Tao L, Murphy ME and English AM. (2002) S-nitrosation of Ca(2+)-loaded and Ca(2+)-free recombinant calbindin D(28K) from human brain. Biochemistry 41(19)6185-92.
  • Titorenko VI, Nicaud JM, Wang H, Chan H and Rachubinski RA. (2002) Acyl-CoA oxidase is imported as a heteropentameric, cofactor-containing complex into peroxisomes of Yarrowia lipolytica. J. Cell Biol. 156481-494.
  • Toubin C, Yeung DY, English AM and Peslherbe GH. (2002) Theoretical evidence that Cu(I) complexation promotes degradation of S-nitrosothiols. J. Am. Chem. Soc. 124(50)14816-7.
2001
  • Aitken SM, Turnbull JL, Percival MD and English AM. (2001) Thermodynamic analysis of the binding of aromatic hydroxamic acid analogues to ferric horseradish peroxidase. Biochemistry 40(46)13980-9.
  • English AM and Wilcox DE. (2001) Effects of metal ions on the oxidation and nitrosation of cysteine residues in proteins and enzymes. Met. Ions Biol. Syst. 38313-50.
  • Filosa A, Wang Y, Ismail AA and English AM. (2001) Two-dimensional infrared correlation spectroscopy as a probe of sequential events in the thermal unfolding of cytochromes c. Biochemistry 40(28)8256-63.
  • Filosa A and English AM. (2001) Mass spectral analysis of protein-based radicals using DBNBS. Nonradical adduct formation versus spin trapping. J. Biol. Chem. 276(24)21022-7.
  • Gaudet P, MacWilliams H and Tsang A. (2001) Inducible expression of exogenous genes in Dictyostelium discoideum using the ribonucleotide reductase promoter. Nucleic Acids Res. 29(2): E5
  • Gorr SU, Jain RK, Kuehn U, Joyce PB and Cowley DJ. (2001) Comparative sorting of neuroendocrine secretory proteins: a search for common ground in a mosaic of sorting models and mechanisms. Mol. Cell. Endocrinol. 172(1-2)1-6.
  • Harris TJ, Awrey DE, Cox BJ, Ravandi A, Tsang A and Siu CH. (2001) Involvement of a triton-insoluble floating fraction in Dictyostelium cell-cell adhesion. J. Biol. Chem. 276(21): 18640-8.
  • Jain RK, Joyce PB, Molinete M, Halban PA and Gorr SU. (2001) Oligomerization of green fluorescent protein in the secretory pathway of endocrine cells. Biochem. J. 360(Pt 3)645-9.
  • Kornblatt JA, Rajotte I and Heitz F. (2001) Reaction of canine plasminogen with 6-aminohexanoate: a thermodynamic study combining fluorescence, circular dichroism, and isothermal titration calorimetry. Biochemistry 40(12)3639-47.
  • Lee J, Filosa S, Bonvin J, Guyon S, Aponte RA and Turnbull JL. (2001) Expression, purification, and characterization of recombinant purine nucleoside phosphorylase from Escherichia coli. Protein Expr. Purif. 22(2)180-8.
  • MacWilliams H, Gaudet P, Deichsel H, Bonfils C and Tsang A. (2001) Biphasic expression of rnrB in Dictyostelium discoideum suggests a direct relationship between cell cycle control and cell differentiation. Differentiation 67(1-2)12-24.
  • Manjasetty BA, Croteau N, Powlowski J and Vrielink A. (2001) Crystallization and preliminary X-ray analysis of dmpFG-encoded 4-hydroxy-2-ketovalerate aldolase--aldehyde dehydrogenase (acylating) from Pseudomonas sp. strain CF600. Acta Crystallogr. D. Biol. Crystallogr. 57(Pt 4)582-5.
  • Mohana GS, Shaanker RU, Ganeshaiah KN and Dayanandan S. (2001) Genetic relatedness among developing seeds and intra fruit seed abortion in Dalbergia sissoo (Fabaceae). Am. J. Bot. 88(7)1181-1188.
  • Rajora OP, Rahman MH, Dayanandan S and Mosseler A. (2001) Isolation, characterization, inheritance and linkage of microsatellite DNA markers in white spruce (Picea glauca) and their usefulness in other spruce species. Molecular and General Genetics 264871-883.
  • Romeo AA, Filosa A, Capobianco JA and English AM. (2001) Metal chelators inhibit S-nitrosation of Cys beta 93 in oxyhemoglobin. J. Am. Chem. Soc. 123(8)1782-3.
  • Secko DM, Khosla M, Gaudet P, Tsang A, Spiegelman GB and Weeks G. (2001) RasG regulates discoidin gene expression during Dictyostelium growth. Exp. Cell. Res. 266(1): 135-41.
  • Shen W, Gomez-Cadenas A, Routly EL, Ho TH, Simmonds JA and Gulick PJ. (2001) The salt stress-inducible protein kinase gene, Esi47, from the salt-tolerant wheatgrass Lophopyrum elongatum is involved in plant hormone signaling. Plant Physiol.125(3)1429-41.
  • Stacy EA, Dayanandan S, Dancik BP and Khasa PD. (2001) Microsatellite DNA markers for the Sri Lankan rainforest tree species, Shorea cordifolia (Dipterocarpaceae) and cross-species amplification in S. megistophylla. Molecular Ecology Notes1A20.
  • Wright PJ and English AM. (2001) Buffer-anion-dependent Ca2+ leaching from horseradish peroxidase at low pH. J. Biol. Inorg. Chem. 6(4)348-58.
2000
  • Anzellotti D and Ibrahim RK. (2000) Novel flavonol 2-oxoglutarate dependent dioxygenase: affinity purification, characterization, and kinetic properties. Arch. Biochem. Biophys. 382(2)161-72.
  • Bantignies B, Seguin J, Muzac I, Dedaldechamp F, Gulick PJ and Ibrahim RK. (2000) Direct evidence for ribonucleolytic activity of a PR10-like protein from white lupin roots. Plant Molecular Biology 42: 871-881.
  • Cowley DJ, Moore YR, Darling DS, Joyce PBM and Gorr SU. (2000) N- and C- terminal domains direct cell-type specific sorting of chromagranin A to secretory granules. Journal of Biological Chemistry 275: 7743-7748.
  • Deng N, Hanic-Joyce PJ and Joyce PBM. (2000) Isolation and characterization of a gene encoding tRNA nucleotidyltransferase from Kluyveromyces lactisYeast 16(10): 945-952.
  • Filosa A and English AM. (2000) Probing local thermal stabilities of bovine, horse, and tuna ferricytochromes c at pH 7. J. Biol. Inorg. Chem. 5(4)448-54.
  • Ibrahim RK. (2000) Phenylpropanoid metabolism. In: Encyclopedia of Life Sciences, Macmillan, Article #1912.
  • Ibrahim RK. (2000) Flavanoids. In: Encyclopedia of Life Sciences, Macmillan, Article #3068.
  • Ibrahim RK and Muzac I. (2000) The Methyltransferase gene superfamily: a tree with multiple branches. In: Recent Advances in Phytochemistry. Vol. 34. Evolution of Metabolic Pathways. Edited by Romeo, J.T., Ibrahim, R.K., Varin, L. and De Luca, V. pp. 349–384. Pergamon, New York.
  • Imbeault NYR, Powlowski JB, Colbert CL, Bolin JT and Eltis L. (2000) Steady-state kinetic characterization and crystallization of a PCB-transforming dioxygenase. Journal of Biological Chemistry 275: 12430-7.
  • Jain RK, Joyce PB and Gorr SU. (2000) Aggregation chaperones enhance aggregation and storage of secretory proteins in endocrine cells. J. Biol. Chem. 275(35)27032-6.
  • Katagiri Y, Ibrahim RK and Tahara S. (2000) HPLC analysis of white lupin isoflavonoids. Biosci. Biotechnol. Biochem. 64(6):1118-25.
  • Kornblatt JA. (2000) Understanding the fluorescence changes of human plasminogen when it binds the ligand, 6-aminohexanoate: a synthesis. Biochim. Biophys. Acta. 1481(1)1-10.
  • Molinette M, Lilla V, Jain R, Joyce PBM, Gorr SU, Ravazzola M and Halban PA. (2000) Trafficking of non-regulated secretory proteins in insulin secreting (INS-1) cells. Diabetalogia 43(9): 1157-64.
  • Muzac I, Wang J, Anzelotti D, Zhang H and Ibrahim RK. (2000) Functional expression of an Arabidopus cDNA clone encoding a flavanoid 3'-O-methyltransferase, and characterization of the gene product. Arch. Biochem. Biophys. 375: 385-388.
  • Rahman MH, Dayanandan S and Rajora OP. (2000) Microsatellite DNA markers in Populus tremuloides. Genome 43293-297.
  • Vedadi M, Barriault D, Sylvestre M and Powlowski J. (2000) Active site residues of cis-2, 3-dihydro-2, 3-dihydroxybiphenyl dehydrogenase from C. testosteroni strain B-356. Biochemistry 39: 5028-34.
1999
  • Barriault D, Vedadi M, Powlowski J and Sylvestre M. (1999) Cis-2, 3 dihydro-2, 3-dihydroxybiphenyl dehydrogenase and cis-1, 2-dihydro-1,2-dihydroxynaphathalene dehydrogenase. Biochemical Biophysical Research Communication 260: 181-187.
  • Bonfils C, Gaudet P and Tsang A. (1999) Identification of cis-regulatory and trans-acting factors regulating the expression of the gene encoding the small subunit of ribonucleotide reductase in Dictyostelium discoideumJournal of Biological Chemistry16: 20384-20390.
  • Cadieux E and Powlowski J. (1999) Characterization of active and inactive forms of the phenol hydroxylase stimulatory protein DmpM. Biochemistry 38: 10714-22.
  • Christendat D and Turnbull JL. (1999) Identifying groups Involved in the binding of prephenate to prephenate dehydrogenase from Escherichia coliBiochemistry 38: 4782-4793.
  • Filosa A, Ismail AA and English AM. (1999) FTIR-monitored thermal titration reveals different mechanisms for the alkaline isomerization of tuna compared to horse and bovine cytochromes c. J. Biol. Inorg. Chem. 4(6): 717-26.
  • Gaudet P and Tsang A. (1999) Regulation of the ribonucleotide reductase small subunit gene by DNA-damaging agents in Dictyostelium discoideumNucleic Acids Research 27: 3042-3048.
  • Kornblatt JA, Kornblatt MJ, Clery C and Balny C. (1999) The effects of hydrostatic pressure on the conformation of plasminogen. Eur. J. Biochem. 265(1)120-6.
  • Kornblatt JA, Kornblatt MJ, Lange R, Mombelli E and Guillemette JG. (1999) The individual tyrosines of proteins: their spectra may or may not differ from those in water or other solvents. Biochim. Biophys. Acta 1431(1)238-48.
  • Marsolais F, Laviolette M, Kakuta Y, Negishi M, Pedersen LC, Auger M and Varin L. (1999) 3'-Phosphoadenosine 5'-phosphosulfate binding site of flavonol 3-sulfotransferase studied by affinity chromatography and 31P NMR. Biochemistry.38(13)4066-71.
  • Munro EM, Climie S, Vandenberg E and Storms RK. (1999) Deletion of eukaryote-specific inserts in thymidylate synthase ofSaccharomyces cerevisiae: In vitro and in vivo effects on enzyme activity. Biochimica et Biophysica Acta 1430: 1-13.
  • Powlowski J and Sahlman L. (1999) Reactivity of the two essential cysteine residues of the periplasmic mercuric ion binding protein, MerP. Journal of Biological Chemistry 274: 33320-33326.
  • Rouleau M, Marsolais F, Richard M, Nicolle L, Voigt B, Adam G and Varin L. (1999) Inactivation of brassinosteroid biological activity by a salicylate-inducible steroid sulfotransferase from Brassica napus. J. Biol. Chem. 274(30)20925-30.
  • Sahlman L, Hagglof E and Powlowski J. (1999) Roles of the four cysteine residues in the function of the integral inner membrane Hg2+-binding protein, MerC. Biochemical Biophysical Research Communication 255: 307-311.
  • Storms RK. (1999) Genome-wide strategies for studying gene function using model systems. (Refereed book chapter) inOrganization of the prokaryotic genome p347-365 R. Charlebois editor. American Society for Microbiology Press Washington DC.
  • Winzeler EA, Shoemaker DD, Astromoff A, Liang H, Anderson K, Andre B, Bangham R, Benito R, Boeke JD, Bussey H, Chu AM, Connelly C, Davis K, Dietrich F, Dow SW, El Bakkoury M, Foury F, Friend SH, Gentalen E, Giaever G, Hegemann JH, Jones T, Laub M, Liao H, Liebundguth N, Lockhart DJ, Lucau-Danila A, Lussier M, M'Rabet N, Menard P, Mittmann M, Pai C, Rebischung C, Revuelta JL, Riles L, Roberts CJ, Ross-MacDonald P, Scherens B, Snyder M, Sookhai-Mahadeo S, Storms RK, Veronneau S, Voet M, Volckaert G, Ward TR, Wysocki R, Yen GS, Yu K, Zimmermann K, Philippsen P, Johnston M, and Davis RW. (1999) Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science285: 901-906.

Although the following publications pre-date the inception of the CSFG, the research presented therein contributed significantly to the knowledge base upon which the Centre was founded.

1996 - 1998
  • Barton AB, Bussey H, Storms RK and Kaback DB. (1997) Molecular cloning of chromosome I DNA from Saccharomyces cerevisiae: characterization of the 54 kb right terminal CDC15-FLO1-PHO11 region. Yeast 13(13)1251-63.
  • Bussey H, Storms RK, Ahmed A, Albermann K, Allen E, Ansorge W, Araujo R, Aparicio A, Barrell B, Badcock K, Benes V, Botstein D, Bowman S, Bruckner M, Carpenter J, Cherry JM, Chung E, Churcher C, Coster F, Davis K, Davis RW, Dietrich FS, Delius H, DiPaolo T and Hani J. (1997) The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI. Nature387(6632 Suppl)103-5.
  • Christendat D, Saridakis VC and Turnbull JL. (1998) Use of site-directed mutagenesis to identify residues specific for each reaction catalyzed by chorismate mutase-prephenate dehydrogenase from Escherichia coli. Biochemistry 37(45)15703-12.
  • Downing TA and Storms RK. (1996) Molecular analysis of UFE1, a Saccharomyces cerevisiae gene essential for spore formation and vegetative growth. Curr. Genet. 30(5)396-403.
  • Gauthier A, Gulick PJ and Ibrahim RK. (1998) Characterization of two cDNA clones which encode O-methyltransferases for the methylation of both flavanoid and phenylpropanoid compounds. Arch. Biochem. Biophys. 351243-249.
  • Hanic-Joyce PJ and Joyce PB. (1998) A high-copy-number ADE2-bearing plasmid for transformation of Candida glabrata.Gene 211(2)395-400.
  • Hein P, Powlowski J, Barriault D, Hurtubise Y, Ahmad D and Sylvestre M. (1998) Biphenyl-associated meta-cleavage dioxygenases from Comamonas testosteroni B-356. Can. J. Microbiol. 44(1)42-9.
  • Kornblatt JA. (1998) The water channel of cytochrome c oxidase: inferences from inhibitor studies. Biophys. J.. 75(6)3127-3.
  • Kornblatt JA, Kornblatt MJ, Rajotte I, Hoa GH and Kahn PC. (1998) Thermodynamic volume cycles for electron transfer in the cytochrome c oxidase and for the binding of cytochrome c to cytochrome c oxidase. Biophys J. 75(1)435-44.
  • Lussier M, Sdicu AM, Winnett E, Vo DH, Sheraton J, Dusterhoft A, Storms RK and Bussey H. (1997) Completion of the Saccharomyces cerevisiae genome sequence allows identification of KTR5, KTR6 and KTR7 and definition of the nine-membered KRE2/MNT1 mannosyltransferase gene family in this organism. Yeast 13(3)267-74.
  • Marsolais F and Varin L. (1998) Recent developments in the study of the structure-function relationship of flavonol sulfotransferases. Chem. Biol. Interact. 109(1-3)117-22.
  • Schleiff E and Turnbull JL. (1998) Characterization of the N-terminal targeting signal binding domain of the mitochondrial outer membrane receptor, Tom20. Biochemistry 37(38)13052-8.
  • Schleiff E and Turnbull JL. (1998) Functional and structural properties of the mitochondrial outer membrane receptor Tom20.Biochemistry 37(38)13043-51.
  • Seguin J, Muzac I and Ibrahim RK. (1998) Purification and immunological characterization of a recombinant trimethylflavonol 3'-O-methyltransferase. Phytochemistry 49(2)319-25.
  • Storms RK, Wang Y, Fortin N, Hall J, Vo DH, Zhong WW, Downing T, Barton AB, Kaback DB, Su Y and Bussey H. (1997) Analysis of a 103 kbp cluster homology region from the left end of Saccharomyces cerevisiae chromosome I. Genome 40(1):151-64.
  • Tsang A, Bonfils C, Czaikaa G, Shtevia A and Grant C. (1996) A prespore-specific gene of Dictyostelium discoideum encodes the small subunit of ribonucleotide reductase Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression 1309 (1-2): 100-108.
  • Ushinsky SC, Bussey H, Ahmed AA, Wang Y, Friesen J and Storms RK. (1997) Functional analysis of a 38 kilobase region on chromosome XVI in Saccharomyces cerevisiae. Genes Funct. 1(4)273-84.
  • Ushinsky SC, Bussey H, Ahmed AA, Wang Y, Friesen J, Williams BA and Storms RK. (1997) Histone H1 in Saccharomyces cerevisiae. Yeast 13(2)Y151-61.
  • Williams BA, Sillaots S, Tsang A and Storms R. (1996) Isolation by genetic complementation of two differentially expressed genes for beta-isopropylmalate dehydrogenase from Aspergillus niger. Curr. Genet. 30(4)305-11.
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